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2 hours ago by

Uruguay

Hello all
I have a multifasta with the protein sequences of an organism and I want to obtain a tsble of predictions of secondary structures similar to the output of TMHMM (www.cbs.dtu.dk/services/TMHMM/).
The problem with TMHMM is that it only predicts alpha-helixes because it assumes all the proteins are transmembrane and doesn't consider beta-sheets.

So, can somebody reccomendme another software that can do the same thing but considering my requirements.

Cheers

Jenifer



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