I'm working on breast cancer data and in particular i am interested in the sample subtype. I downloaded the BRCA dataset from TCGA, where i got both RNASeq read count matrix and the matrix with clinical information with the variable "subtype" that i need (in this case the subtypes are LuminalA, LuminalB, Basal and Her).
Now i need to get another dataset that i can use to compare to the TCGA data, but i can't find it anywhere.
I need a RNASeq read count matrix, but most importantly, i need to have the information about the subtype of the samples.
It looks like there are no data repositories that offer this variable.
Do you know where can i download such data?
Thanks a lot!