I am tracking a gene in GISTIC from my analysis and a paper on the the cancer and basically the same raw data, but I am seeing some genes like KRAS, ERBB2, etc location on peaks are different in my GISTIC output and that paper
For instance in my data
KRAS chr12:25340002-26090000 12p12.1
In the paper
12p11.23 2.9593e-26 4.2718e-26 chr12:22440282-27280000
-td in GISTIC has been
Actually I don't know how to explain this
Can you help me?