• about Grep the complete sequences containing a specific motif in a fasta file

    How to Grep the complete sequences containing a specific motif in a fasta file? Also, I want to i...

  • exome sequence analysis

    In VCf file, format GT:AD:GP and its value in tumor and normal column I found no values.

    I got v...

  • FastQ check result

    Hi... I've never done a quality control check of sequence data. Can you tell me how to deal with ...

  • New Go Terms After Topgo Enrichment?

    Hi there,

    I ran an enrichment analysis with custom annotations using TopGO and surprisingly I ob...

  • Relatedness inference using KING

    Hi everyone! I need some help on KING. I have a multivcf, containing informations about a certain...

  • Error with String data base CYTOSCAPE

    ![Hello, I have this error when try to donwload a network from STRING to Cytoscape, can anoyone h...

  • kmer content failling with fastqc

    Dear all
    I have trimmed my data(illumina 2*150PE) using bbduk from bbmap suite and still have thi...

  • Problem in Sequence Length Distribution

    Hi! Good Afternoon

    I think I'm having some trouble with my sequences. I have an Escherichia col...

  • FASTQC result FAILED in adapter content and k-mer section!!!

    Hi there!!! I am analysing already submitted data in SRA.
    My fastqc result shows "No overrepresen...

  • goseq pwf length bias plot: help interpreting plot

    Hi!
    I am using goseq on some bovine data and I am using Ensembl IDs for bovine genome UMD3.1, whi...

  • EnhancedVolcano selectLab issue

    Hi everyone,

    I am trying to use EnhancedVolcano in R to plot the results from my rna-seq analysi...

  • Biopython Entrez Query Record of IDs doesn't Match the Query Search Results

    does anyone know why the List of my IDs is only 20 while the Count from my results in my NCBI is ...

  • Missing a row name in Heatmap.2

    Hi, I use heatmap.2 (from ggplots) to produce heatmaps. Sometimes I notice that I miss a row name...

  • samtools mpileup Aborted (Core dumped)

    I'm just trying to use samtools mpileup and it is aborting with out showing any error for some ba...

  • HGVS for F8 Intron 22 inversion (revisited)

    Greetings,

    For this picture of a F8 Intron 22 Inversion Mutation (where we only know that the br...

  • What exact statistical method should I use to compare coverage profiles of two samples after targeted DNA sequencing?

    I have results of targeted sequencing. It is several csv files (tables) with information about th...

  • exclude gene with features from gff3 file

    Hi all,
    I have a file with gene names like this one (file1):

    AT1G01010

    AT1G01020

    AT1G01030

    AT...



  • Source link